Packages
ImageJ software packages
ImageJ by Wayne Rasband: Basic software package. Well documented. Online update possible.
MacBiophotonics ImageJ
asic package plus plugins useful for light microscopists. Online manual available here. No update since Oct. 2008
Fiji
A new, very powerful, actively developed package. Many functions for light and electron microscopists. Powerful analysis plugins. Online update possible.
Reader modules
LOCI Bioformats reader
Manuals, Tutorials
Download manuals
By Volker Baecker (for basic to advanced users) (Download)
Online manuals
By Tony Collins, McMaster Univ., Hamilton, Ontario (Canada) (Download)